As a result, intensive research has been focused on modifying the surfaces of these materials at the nano-scale 10, 11, 12 and/or creating a nano-structured surface architecture, often by mimicking naturally occurring surfaces, in order to restrict and eliminate bacterial attachment 13, 14. Bacterial colonization of biomaterial surfaces and their organization in complex microbial aggregates have received considerable attention over the past few decades 6, 7, 8, 9, 10, 11, 12. They represent substrata upon which bacteria can attach and successfully colonize, forming biofilms 4, 5, 6. Titanium and titanium alloys 1 are biomaterials that are widely used in biomedical applications 2, 3, 4, 5, 6. We validated our approach by graphically depicting the interactions between the two bacteria being used for modeling purposes, Staphylococcus aureus and Pseudomonas aeruginosa, with different titanium substrate surfaces that are routinely used in the production of biomedical devices. This capability provides a practical aid to knowledge discovery, assists in the dissemination of research results and provides an opportunity for an improved public understanding.
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The ‘Dynamics’ and ‘nDynamics’ capabilities of the Maya software allowed the construction and visualization of plausible interaction scenarios. Our approach comprises a semi-automated stage, where actual surface topographic parameters, obtained using an atomic force microscope, are imported into Maya via a custom Python script, followed by a ‘creative stage’, where the bacterial cells and their interactions with the surfaces are visualized using available experimental data.
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We present a novel approach for the three-dimensional visualization of bacterial interactions with nano-structured surfaces using the software package Autodesk Maya. As a result, there is a need for innovative approaches to enable researchers to visualize the biological processes taking place, despite the fact that it is not possible to directly observe these processes.
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